MolNFT v1 · #28970 · protein
Solution structure of an rRNA methyltransferase (ermam) that confers macrolide-lincosamide-streptogramin antibiotic resistance, NMR, minimized average structure
1YUB: “Solution structure of an rRNA methyltransferase (ermam) that confers macrolide-lincosamide-streptogramin…”. Solution nmr, 1 pocket (best druggability 0.67). MolNFT v1 #28970 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 1YUB
- Type
- protein
- Length
- 245 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- RRNA methyltransferase
- EC
- 2.1.1.48
- UniProt
- P21236
- Pockets
- 1 · best druggability 0.67
Structure
solution nmr · 1 distinct chain · 31% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RRNA methyltransferase (EC 2.1.1.48) | protein | 245 | 31% helix, 18% strand | P21236 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 282 | 0.67 | 0.82 | 30 | empty |
Compared structures
- 1YUB · Solution structure of an rRNA methyltransferase (ermam) that confers… · the same entry in another collection · chain A against A, TM-score 1.00
- P21236 · AlphaFold monomer V2.0 prediction for rRNA adenine N-6-methyltransferase (P21236) · a predicted model of the same protein · chain A against A, TM-score 0.73
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P21236
- Elsewhere: RCSB PDB 1YUB · PDBe 1YUB · UniProt P21236
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