MolNFT v1 · #28928 · protein

Crystal structure of tem-76 beta-lactamase at 1.4 ångström resolution

1YT4 · Beta-lactamase tem: “Crystal structure of tem-76 beta-lactamase at 1.4 ångström resolution”. X-ray diffraction, 1 pocket (best druggability 0.32). MolNFT v1 #28928 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 1YT4
Type: protein
Length: 263 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Beta-lactamase tem
EC: 3.5.2.6
UniProt: P62593
Pockets: 1 · best druggability 0.32

Structure

x-ray diffraction · 1 distinct chain · 45% helix, 17% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Beta-lactamase tem (EC 3.5.2.6)	protein	263	45% helix, 17% strand	P62593

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	83	0.32	0.74	15	empty

Modifications

Observed in the structure: 1 disulfide (disulfide).

Compared structures

1YT4 · Crystal structure of TEM-76 beta-lactamase at 1.4 Angstrom resolution · the same entry in another collection · chain A against A, TM-score 1.00
P62593 · AlphaFold monomer V2.0 prediction for beta-lactamase tem (P62593) · a predicted model of the same protein · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P62593
Elsewhere: RCSB PDB 1YT4 · PDBe 1YT4 · UniProt P62593

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