MolNFT v1 · #28500 · RNA
Solution structure of the scylv P1-P2 frameshifting pseudoknot, 20 lowest energy structures
1YG3 · Scylv RNA pseudoknot: “Solution structure of the scylv P1-P2 frameshifting pseudoknot, 20 lowest energy structures”. Solution nmr, 1 pocket (best druggability 0.26). MolNFT v1 #28500 on GenesisL1: 3D structure, binding sites and…
- PDB
- 1YG3
- Type
- RNA
- Length
- 28 nucleotides
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Scylv RNA pseudoknot
- Pockets
- 1 · best druggability 0.26
Structure
solution nmr · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Scylv RNA pseudoknot | rna | 28 | — | — |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 58 | 0.26 | 0.74 | 11 | empty |
Modifications
Observed in the structure: 1 modified (nucleotide modification).
Compared structures
- 1YG3 · Solution Structure of the ScYLV P1-P2 Frameshifting Pseudoknot, 20 Lowest Energy… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 1YG3 · PDBe 1YG3
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