MolNFT v1 · #26634 · protein
Crystal structure of rhodanese homolog TT1651 from an extremely thermophilic bacterium thermus thermophilus HB8
1WV9: “Crystal structure of rhodanese homolog TT1651 from an extremely thermophilic bacterium thermus thermophilus…”. X-ray diffraction, 1 pocket (best druggability 0.36). MolNFT v1 #26634 on GenesisL1: 3D structure, binding sites and…
- PDB
- 1WV9
- Type
- protein
- Length
- 173 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Rhodanese homolog TT1651
- UniProt
- Q5SKN0
- Pockets
- 1 · best druggability 0.36
Structure
x-ray diffraction · 2 distinct chains · 30% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Rhodanese homolog TT1651 | protein | 87 | 33% helix, 18% strand | Q5SKN0 |
| B | Rhodanese homolog TT1651 | protein | 86 | 27% helix, 19% strand | Q5SKN0 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 98 | 0.36 | 0.75 | 23 | empty |
Interfaces
1 interface between chains.
- A–B · 412 Ų buried · 8 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 3 modified (engineered).
Compared structures
- 1WV9 · Crystal Structure of Rhodanese Homolog TT1651 from an Extremely Thermophilic Bacterium… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5SKN0
- Elsewhere: RCSB PDB 1WV9 · PDBe 1WV9 · UniProt Q5SKN0
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.