MolNFT v1 · #26249 · protein
Solution structure of the N-terminal zn binding domain of HIV-1 integrase (D form), NMR, 40 structures
1WJB: “Solution structure of the N-terminal zn binding domain of HIV-1 integrase (D form), NMR, 40 structures”. Solution nmr, 1 ligand (ZN). MolNFT v1 #26249 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 1WJB
- Type
- protein
- Length
- 110 residues
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- HIV-1 integrase
- UniProt
- P12497
- Ligands
- ZN
Structure
solution nmr · 1 distinct chain · 60% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | HIV-1 integrase | protein | 55 | 60% helix, 0% strand | P12497 |
Ligands and binding sites
- ZN · Zinc ion · metal · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 681 Ų buried · 4 hydrogen bonds · protein-protein
Compared structures
- 1WJB · Solution structure of the N-terminal zn binding domain of HIV-1 integrase (D form), NMR… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P12497
- Elsewhere: RCSB PDB 1WJB · PDBe 1WJB · UniProt P12497
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