MolNFT v1 · #26030 · protein

Structure of the bacterial chromosome segregation protein soj

1WCV: “Structure of the bacterial chromosome segregation protein soj”. X-ray diffraction, 2 ligands (IOD, CL), 1 pocket (best druggability 0.57). MolNFT v1 #26030 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 1WCV
Type: protein
Length: 243 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Segregation protein
UniProt: Q72H90
Ligands: IOD, CL
Pockets: 1 · best druggability 0.57

Structure

x-ray diffraction · 1 distinct chain · 48% helix, 16% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
1	Segregation protein	protein	243	48% helix, 16% strand	Q72H90

Ligands and binding sites

IOD · Iodide ion · ion · 5 copies · chains 1
CL · Chloride ion · ion · 2 copies

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	64	0.57	0.89	19	IOD

Compared structures

1WCV · Structure of the bacterial chromosome segregation protein Soj · the same entry in another collection · chain 1 against 1, TM-score 1.00
Q72H90 · AlphaFold monomer V2.0 prediction for chromosome-partitioning ATPase soj (Q72H90) · a predicted model of the same protein · chain 1 against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q72H90
Elsewhere: RCSB PDB 1WCV · PDBe 1WCV · UniProt Q72H90

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