MolNFT v1 · #2601 · protein

Lactose-liganded congerin I

1C1L · Protein (congerin I): “Lactose-liganded congerin I”. X-ray diffraction, 2 ligands (BGC, GAL), 2 pockets (best druggability 0.48). MolNFT v1 #2601 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 1C1L
Type: protein
Length: 135 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Protein (congerin I)
UniProt: P26788
Ligands: BGC, GAL
Pockets: 2 · best druggability 0.48

Structure

x-ray diffraction · 1 distinct chain · 2% helix, 56% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Protein (congerin I)	protein	135	2% helix, 56% strand	P26788

Ligands and binding sites

BGC · beta-D-glucopyranose · sugar · chains A
GAL · beta-D-galactopyranose · sugar · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	130	0.48	0.78	17	empty
2	59	0.29	0.74	19	GAL

Compared structures

1C1L · Lactose-liganded congerin I · the same entry in another collection · chain A against A, TM-score 1.00
P26788 · AlphaFold monomer V2.0 prediction for congerin-1 (P26788) · a predicted model of the same protein · chain A against A, TM-score 0.94

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P26788
Elsewhere: RCSB PDB 1C1L · PDBe 1C1L · UniProt P26788

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