MolNFT v1 · #25487 · DNA
Unusual helical packing in crystals of DNA bearing a mutation hot spot
1VTD · DNA (5'-D(*AP*CP*CP*GP*GP*CP*GP*CP*CP*AP*CP*A)-3'): “Unusual helical packing in crystals of DNA bearing a mutation hot spot”. X-ray diffraction. MolNFT v1 #25487 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 1VTD
- Type
- DNA
- Length
- 24 nucleotides
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- DNA (5'-D(*AP*CP*CP*GP*GP*CP*GP*CP*CP*AP*CP*A)-3'); DNA…
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA (5'-D(*AP*CP*CP*GP*GP*CP*GP*CP*CP*AP*CP*A)-3') | dna | 12 | — | — |
| B | DNA (5'-D(*TP*GP*TP*GP*GP*CP*GP*CP*CP*GP*GP*T)-3') | dna | 12 | — | — |
Interfaces
1 interface between chains.
- A–B · 527 Ų buried · 44 hydrogen bonds · nucleic-nucleic
Compared structures
- 1VTD · Unusual helical packing in crystals of DNA bearing a mutation hot spot · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 1VTD · PDBe 1VTD
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