MolNFT v1 · #23624 · protein

The crystal structure of murine april, pH 8.5

1U5Z · Tumor necrosis factor ligand superfamily member 13: “The crystal structure of murine april, pH 8.5”. X-ray diffraction, 1 ligand (NI). MolNFT v1 #23624 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 1U5Z
Type: protein
Length: 128 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Tumor necrosis factor ligand superfamily member 13
UniProt: Q9D777
Ligands: NI

Structure

x-ray diffraction · 1 distinct chain · 0% helix, 63% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Tumor necrosis factor ligand superfamily member 13	protein	128	0% helix, 63% strand	Q9D777

Ligands and binding sites

NI · Nickel (II) ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 1 disulfide (disulfide).

Compared structures

1U5Z · The Crystal structure of murine APRIL, pH 8.5 · the same entry in another collection · chain A against A, TM-score 1.00
Q9D777 · AlphaFold monomer V2.0 prediction for tumor necrosis factor ligand superfamily member 13… · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9D777
Elsewhere: RCSB PDB 1U5Z · PDBe 1U5Z · UniProt Q9D777

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