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MolNFT v1 · #23591 · protein

Crystal structure of human rantes mutant 44-aana-47

1U4R · Small inducible cytokine A5: “Crystal structure of human rantes mutant 44-aana-47”. X-ray diffraction, 1 ligand (SO4). MolNFT v1 #23591 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
1U4R
Type
protein
Length
262 residues
Chains
4
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Small inducible cytokine A5
UniProt
P13501
Ligands
SO4

Structure

x-ray diffraction · 3 distinct chains · 22% helix, 27% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ASmall inducible cytokine A5protein6223% helix, 26% strandP13501
B, DSmall inducible cytokine A5protein6819% helix, 26% strandP13501
CSmall inducible cytokine A5protein6423% helix, 30% strandP13501

Ligands and binding sites

  • SO4 · Sulfate ion · ion · 3 copies · chains A, B, C

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Interfaces

3 interfaces between chains.

  • A–B · 879 Ų buried · 14 hydrogen bonds · protein-protein
  • C–D · 842 Ų buried · 13 hydrogen bonds · protein-protein
  • A–D · 11 Ų buried · 0 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 8 disulfide (disulfide).

Compared structures

  • 1U4R · Crystal Structure of human RANTES mutant 44-AANA-47 · the same entry in another collection · chain D against D, TM-score 1.00
  • P13501 · AlphaFold monomer V2.0 prediction for C-C motif chemokine 5 (P13501) · a predicted model of the same protein · chain C against A, TM-score 0.96

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