MolNFT v1 · #2318 · protein
Acutolysin a from snake venom of agkistrodon acutus at pH 7.5
1BSW · Protein (acutolysin a): “Acutolysin a from snake venom of agkistrodon acutus at pH 7.5”. X-ray diffraction, 2 ligands (ZN, CA), 1 pocket (best druggability 0.38). MolNFT v1 #2318 on GenesisL1: 3D structure, binding sites and pockets…
- PDB
- 1BSW
- Type
- protein
- Length
- 197 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Protein (acutolysin a)
- UniProt
- Q9PW35
- Ligands
- ZN, CA
- Pockets
- 1 · best druggability 0.38
Structure
x-ray diffraction · 1 distinct chain · 38% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein (acutolysin a) | protein | 197 | 38% helix, 17% strand | Q9PW35 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 64 | 0.38 | 0.79 | 19 | empty |
Modifications
Observed in the structure: 3 disulfide (disulfide).
Compared structures
- 1BSW · Acutolysin a from snake venom of agkistrodon acutus at pH 7.5 · the same entry in another collection · chain A against A, TM-score 1.00
- Q9PW35 · AlphaFold monomer V2.0 prediction for snake venom metalloproteinase acutolysin-a (Q9PW35) · a predicted model of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9PW35
- Elsewhere: RCSB PDB 1BSW · PDBe 1BSW · UniProt Q9PW35
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