MolNFT v1 · #22591 · protein

Crystal structure of V44A, G45P cp rubredoxin

1T9P: “Crystal structure of V44A, G45P cp rubredoxin”. X-ray diffraction, 1 ligand (FE). MolNFT v1 #22591 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 1T9P
Type: protein
Length: 162 residues
Chains: 3
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Rubredoxin
UniProt: P00268
Ligands: FE

Structure

x-ray diffraction · 1 distinct chain · 17% helix, 22% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B, C	Rubredoxin	protein	54	17% helix, 22% strand	P00268

Ligands and binding sites

FE · Fe (III) ion · metal · 3 copies · chains A, B, C

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Interfaces

1 interface between chains.

A–C · 457 Å² buried · 5 hydrogen bonds · protein-protein

Compared structures

1T9P · Crystal Structure of V44A, G45P Cp Rubredoxin · the same entry in another collection · chain A against A, TM-score 1.00
P00268 · AlphaFold monomer V2.0 prediction for rubredoxin (P00268) · a predicted model of the same protein · chain A against A, TM-score 0.94

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P00268
Elsewhere: RCSB PDB 1T9P · PDBe 1T9P · UniProt P00268

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