MolNFT v1 · #22452 · protein
Structural transitions as determinants of calcium-dependent antibiotic daptomycin
1T5N: “Structural transitions as determinants of calcium-dependent antibiotic daptomycin”. Solution nmr, 1 ligand (DKA). MolNFT v1 #22452 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 1T5N
- Type
- protein
- Length
- 13 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Daptomycin
- Ligands
- DKA
Structure
solution nmr · 1 distinct chain · 0% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Daptomycin | protein | 13 | 0% helix, 0% strand | — |
Ligands and binding sites
- DKA · Decanoic acid · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 3 d-amino, 3 modified, 1 covalent (D-amino acid, nonstandard, covalent ligand).
Compared structures
- 1T5N · Structural transitions as determinants of calcium-dependent antibiotic daptomycin · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 1T5N · PDBe 1T5N
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