GL1X · GenesisL1 explorer

MolNFT v1 · #22113 · protein

SAVINASE

1SVN · Savinase (tm): “SAVINASE”. X-ray diffraction, 1 ligand (CA), 1 pocket (best druggability 0.33). MolNFT v1 #22113 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
1SVN
Type
protein
Length
269 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Savinase (tm)
EC
3.4.21.62
UniProt
P29600
Ligands
CA
Pockets
1 · best druggability 0.33

Structure

x-ray diffraction · 1 distinct chain · 31% helix, 21% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ASavinase (tm) (EC 3.4.21.62)protein26931% helix, 21% strandP29600

Ligands and binding sites

  • CA · Calcium ion · metal · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
1620.330.7723empty

Compared structures

  • 1SVN · SAVINASE · the same entry in another collection · chain A against A, TM-score 1.00
  • P29600 · AlphaFold monomer V2.0 prediction for subtilisin savinase (P29600) · a predicted model of the same protein · chain A against A, TM-score 1.00

Analyse

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