MolNFT v1 · #21936 · protein
Crystal structure of the putative glyoxylate induced protein from pseudomonas aeruginosa, northeast structural genomics target PAR14
1SQ4 · Glyoxylate-induced protein: “Crystal structure of the putative glyoxylate induced protein from pseudomonas aeruginosa, northeast…”. X-ray diffraction, 1 ligand (SCN), 1 pocket (best druggability 0.49). MolNFT v1 #21936 on GenesisL1…
- PDB
- 1SQ4
- Type
- protein
- Length
- 537 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Glyoxylate-induced protein
- UniProt
- Q9I4J5
- Ligands
- SCN
- Pockets
- 1 · best druggability 0.49
Structure
x-ray diffraction · 2 distinct chains · 4% helix, 45% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Glyoxylate-induced protein | protein | 270 | 4% helix, 46% strand | Q9I4J5 |
| B | Glyoxylate-induced protein | protein | 267 | 4% helix, 45% strand | Q9I4J5 |
Ligands and binding sites
- SCN · Thiocyanate ion · ion · 4 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 202 | 0.49 | 0.75 | 29 | empty |
Interfaces
1 interface between chains.
- A–B · 487 Ų buried · 3 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 24 modified (engineered).
Compared structures
- 1SQ4 · Crystal Structure of the Putative Glyoxylate Induced Protein from Pseudomonas aeruginosa… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9I4J5
- Elsewhere: RCSB PDB 1SQ4 · PDBe 1SQ4 · UniProt Q9I4J5
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