MolNFT v1 · #21781 · protein

Calcium-loaded apo-aequorin from aequorea victoria

1SL8 · Aequorin 1: “Calcium-loaded apo-aequorin from aequorea victoria”. X-ray diffraction, 1 ligand (CA), 1 pocket (best druggability 0.71). MolNFT v1 #21781 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 1SL8
Type: protein
Length: 181 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Aequorin 1
UniProt: P07164
Ligands: CA
Pockets: 1 · best druggability 0.71

Structure

x-ray diffraction · 1 distinct chain · 64% helix, 4% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Aequorin 1	protein	181	64% helix, 4% strand	P07164

Ligands and binding sites

CA · Calcium ion · metal · 3 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	242	0.71	0.86	29	empty

Compared structures

1SL8 · Calcium-loaded apo-aequorin from Aequorea victoria · the same entry in another collection · chain A against A, TM-score 1.00
P07164 · AlphaFold monomer V2.0 prediction for aequorin-1 (P07164) · a predicted model of the same protein · chain A against A, TM-score 0.85

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P07164
Elsewhere: RCSB PDB 1SL8 · PDBe 1SL8 · UniProt P07164

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