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MolNFT v1 · #21470 · protein

Subtilisin bpn' 8397 (E.C. 3.4.21.14) mutant (M50F, N76D, G169A, Q206C, N218S)

1SBI · Subtilisin 8397: “Subtilisin bpn' 8397 (E.C. 3.4.21.14) mutant (M50F, N76D, G169A, Q206C, N218S)”. X-ray diffraction, 1 ligand (CA), 1 pocket (best druggability 0.36). MolNFT v1 #21470 on GenesisL1: 3D structure, binding sites and…

PDB
1SBI
Type
protein
Length
275 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Subtilisin 8397
EC
3.4.21.62
UniProt
P00782
Ligands
CA
Pockets
1 · best druggability 0.36

Structure

x-ray diffraction · 1 distinct chain · 29% helix, 20% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ASubtilisin 8397 (EC 3.4.21.62)protein27529% helix, 20% strandP00782

Ligands and binding sites

  • CA · Calcium ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
11040.360.7526empty

Modifications

Observed in the structure: 1 modified (oxidation).

Compared structures

  • 1SBI · Subtilisin bpn' 8397 (E.C. 3.4.21.14) mutant (M50F, N76D, G169A, Q206C, N218S) · the same entry in another collection · chain A against A, TM-score 1.00
  • P00782 · AlphaFold monomer V2.0 prediction for subtilisin bpn' (P00782) · a predicted model of the same protein · chain A against A, TM-score 1.00

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