MolNFT v1 · #21041 · protein
C-terminal region of a. fulgidus fen-1 complexed with a. fulgidus PCNA
1RXZ · DNA polymerase sliding clamp: “C-terminal region of a. fulgidus fen-1 complexed with a. fulgidus PCNA”. X-ray diffraction. MolNFT v1 #21041 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 1RXZ
- Type
- protein
- Length
- 256 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- DNA polymerase sliding clamp; Flap structure-specific endonuclease
- UniProt
- O29912, O29975
Structure
x-ray diffraction · 2 distinct chains · 22% helix, 43% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA polymerase sliding clamp | protein | 245 | 22% helix, 43% strand | O29912 |
| B | Flap structure-specific endonuclease | protein | 11 | 27% helix, 27% strand | O29975 |
Interfaces
1 interface between chains.
- A–B · 678 Ų buried · 11 hydrogen bonds · protein-protein
Compared structures
- 1RXZ · C-terminal region of A. fulgidus FEN-1 complexed with A. fulgidus PCNA · the same entry in another collection · chain A against A, TM-score 1.00
- O29912 · AlphaFold monomer V2.0 prediction for DNA polymerase sliding clamp (O29912) · a predicted model of the same protein · chain A against A, TM-score 0.98
- O29975 · AlphaFold monomer V2.0 prediction for flap endonuclease 1 (O29975) · a predicted model of the same protein · chain B against A, TM-score 0.38
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O29912
- Every structure of UniProt O29975
- Elsewhere: RCSB PDB 1RXZ · PDBe 1RXZ · UniProt O29912 · UniProt O29975
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