Research workbench

C-terminal region of a. fulgidus fen-1 complexed with a. fulgidus PCNA

Analyse C-terminal region of a. fulgidus fen-1 complexed with a. fulgidus PCNA in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1RXZ
Type: protein
Length: 256 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: DNA polymerase sliding clamp; Flap structure-specific endonuclease
UniProt: O29912, O29975

Structure

x-ray diffraction · 2 distinct chains · 22% helix, 43% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	DNA polymerase sliding clamp	protein	245	22% helix, 43% strand	O29912
B	Flap structure-specific endonuclease	protein	11	27% helix, 27% strand	O29975

Interfaces

1 interface between chains.

A–B · 678 Å² buried · 11 hydrogen bonds · protein-protein

Compared structures

1RXZ · C-terminal region of A. fulgidus FEN-1 complexed with A. fulgidus PCNA · the same entry in another collection · chain A against A, TM-score 1.00
O29912 · AlphaFold monomer V2.0 prediction for DNA polymerase sliding clamp (O29912) · a predicted model of the same protein · chain A against A, TM-score 0.98
O29975 · AlphaFold monomer V2.0 prediction for flap endonuclease 1 (O29975) · a predicted model of the same protein · chain B against A, TM-score 0.38

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O29912
Every structure of UniProt O29975
Elsewhere: RCSB PDB 1RXZ · PDBe 1RXZ · UniProt O29912 · UniProt O29975

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