MolNFT v1 · #20360 · protein
Structure of the trigonal form of recombinant oxidized flavodoxin from anabaena 7120 at 1.40 ångströms resolution
1RCF: “Structure of the trigonal form of recombinant oxidized flavodoxin from anabaena 7120 at 1.40 ångströms…”. X-ray diffraction, 2 ligands (FMN, SO4), 1 pocket (best druggability 0.52). MolNFT v1 #20360 on GenesisL1: 3D structure…
- PDB
- 1RCF
- Type
- protein
- Length
- 169 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Flavodoxin
- UniProt
- P0A3D9
- Ligands
- FMN, SO4
- Pockets
- 1 · best druggability 0.52
Structure
x-ray diffraction · 1 distinct chain · 34% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Flavodoxin | protein | 169 | 34% helix, 22% strand | P0A3D9 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 84 | 0.52 | 0.84 | 22 | FMN |
Compared structures
- 1RCF · Structure of the trigonal form of recombinant oxidized flavodoxin from anabaena 7120 at… · the same entry in another collection · chain A against A, TM-score 1.00
- P0A3D9 · AlphaFold monomer V2.0 prediction for flavodoxin (P0A3D9) · a predicted model of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0A3D9
- Elsewhere: RCSB PDB 1RCF · PDBe 1RCF · UniProt P0A3D9
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