Research workbench
Structure of the trigonal form of recombinant oxidized flavodoxin from anabaena 7120 at 1.40 ångströms resolution
Analyse Structure of the trigonal form of recombinant oxidized flavodoxin from anabaena… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1RCF
- Type
- protein
- Length
- 169 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Flavodoxin
- UniProt
- P0A3D9
- Ligands
- FMN, SO4
- Pockets
- 1 · best druggability 0.52
Structure
x-ray diffraction · 1 distinct chain · 34% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Flavodoxin | protein | 169 | 34% helix, 22% strand | P0A3D9 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 84 | 0.52 | 0.84 | 22 | FMN |
Compared structures
- 1RCF · Structure of the trigonal form of recombinant oxidized flavodoxin from anabaena 7120 at… · the same entry in another collection · chain A against A, TM-score 1.00
- P0A3D9 · AlphaFold monomer V2.0 prediction for flavodoxin (P0A3D9) · a predicted model of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0A3D9
- Elsewhere: RCSB PDB 1RCF · PDBe 1RCF · UniProt P0A3D9
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