MolNFT v1 · #20296 · protein

Poliovirus polymerase with a 68 residue N-terminal truncation

1RAJ · Genome polyprotein: “Poliovirus polymerase with a 68 residue N-terminal truncation”. X-ray diffraction, 3 pockets (best druggability 0.52). MolNFT v1 #20296 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 1RAJ
Type: protein
Length: 257 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Genome polyprotein
EC: 2.7.7.48
UniProt: P03300
Pockets: 3 · best druggability 0.52

Structure

x-ray diffraction · 1 distinct chain · 49% helix, 12% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Genome polyprotein (EC 2.7.7.48)	protein	257	49% helix, 12% strand	P03300

Pockets

3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	170	0.52	0.79	34	empty
2	117	0.43	0.77	16	empty
3	54	0.32	0.76	11	empty

Compared structures

1RAJ · Poliovirus Polymerase with a 68 residue N-terminal truncation · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P03300
Elsewhere: RCSB PDB 1RAJ · PDBe 1RAJ · UniProt P03300

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.