MolNFT v1 · #20047 · DNA
D(GCATGCT) + NI2+
1R2O · 5'-D(*GP*CP*AP*TP*GP*CP*T)-3': “D(GCATGCT) + NI2+”. X-ray diffraction, 1 ligand (NI). MolNFT v1 #20047 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 1R2O
- Type
- DNA
- Length
- 7 nucleotides
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- 5'-D(*GP*CP*AP*TP*GP*CP*T)-3'
- Ligands
- NI
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| X | 5'-D(*GP*CP*AP*TP*GP*CP*T)-3' | dna | 7 | — | — |
Ligands and binding sites
- NI · Nickel (II) ion · metal · chains X
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 1R2O · d(GCATGCT) + Ni2+ · the same entry in another collection · chain X against X, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 1R2O · PDBe 1R2O
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