MolNFT v1 · #19238 · protein

Crystal structure of 3TC-resistant M184I mutant of HIV-1 reverse transcriptase

1QE1 · Reverse transcriptase, subunit P66: “Crystal structure of 3TC-resistant M184I mutant of HIV-1 reverse transcriptase”. X-ray diffraction, 15 pockets (best druggability 0.72). MolNFT v1 #19238 on GenesisL1: 3D structure, binding sites…

PDB: 1QE1
Type: protein
Length: 971 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Reverse transcriptase, subunit P66; Reverse transcriptase, subunit P51
EC: 2.7.7.49
UniProt: P03366
Pockets: 15 · best druggability 0.72

Structure

x-ray diffraction · 2 distinct chains · 31% helix, 17% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Reverse transcriptase, subunit P66 (EC 2.7.7.49)	protein	556	31% helix, 17% strand	P03366
B	Reverse transcriptase, subunit P51 (EC 2.7.7.49)	protein	415	32% helix, 16% strand	P03366

Pockets

15 pockets found on a 1 Å grid, 7 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	822	0.72	0.77	68	empty
2	425	0.66	0.79	60	empty
3	460	0.65	0.77	52	empty
4	409	0.64	0.78	41	empty
5	290	0.60	0.78	35	empty

Interfaces

1 interface between chains.

A–B · 2783 Å² buried · 36 hydrogen bonds · protein-protein

Compared structures

1QE1 · Crystal structure of 3TC-resistant M184I mutant of HIV-1 reverse transcriptase · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P03366
Elsewhere: RCSB PDB 1QE1 · PDBe 1QE1 · UniProt P03366

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