MolNFT v1 · #191351 · protein
Crystal structure of the GDP-D-glycero-4-keto-D-lyxo-heptose-3,5- epimerase from campylobacter jejuni, serotype HS:42
8DCO: “Crystal structure of the GDP-D-glycero-4-keto-D-lyxo-heptose-3,5- epimerase from campylobacter jejuni…”. X-ray diffraction, 2 ligands (GDP, CL). MolNFT v1 #191351 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 8DCO
- Type
- protein
- Length
- 359 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- F2X7E5
- Ligands
- GDP, CL
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 178 | — | F2X7E5 |
| B | — | protein | 181 | — | F2X7E5 |
Ligands and binding sites
- GDP · Guanosine-5'-diphosphate · ligand · 2 copies · chains A, B
- CL · Chloride ion · ion · chains A
- EDO · 1,2-ethanediol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 8DCO · Crystal structure of the GDP-D-glycero-4-keto-D-lyxo-heptose-3,5-epimerase from… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt F2X7E5
- Elsewhere: RCSB PDB 8DCO · PDBe 8DCO · UniProt F2X7E5
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