MolNFT v1 · #191091 · protein + DNA
Cryo-EM structure of human transferrin receptor 1 bound to DNA aptamer
7ZQS: “Cryo-EM structure of human transferrin receptor 1 bound to DNA aptamer”. Electron microscopy, 2 ligands (NAG, MG). MolNFT v1 #191091 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7ZQS
- Type
- protein + DNA
- Length
- 1,338 residues
- Chains
- 4
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P02786
- Ligands
- NAG, MG
Structure
electron microscopy · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, C | — | dna | 30 | — | — |
| B, D | — | protein | 639 | — | P02786 |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 10 copies · chains B, D
- MG · Magnesium ion · metal · 4 copies · chains A, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7ZQS · Cryo-EM Structure of Human Transferrin Receptor 1 bound to DNA Aptamer · the same entry in another collection · chain B against B, TM-score 1.00
- P02786 · AlphaFold monomer V2.0 prediction for transferrin receptor protein 1 (P02786) · a predicted model of the same protein · chain B against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P02786
- Elsewhere: RCSB PDB 7ZQS · PDBe 7ZQS · UniProt P02786
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