MolNFT v1 · #191061 · protein
Human gabarap in complex with stapled peptide PEN8-ortho
7ZL7: “Human gabarap in complex with stapled peptide PEN8-ortho”. X-ray diffraction, 5 ligands (ACE, OXE, NA). MolNFT v1 #191061 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7ZL7
- Type
- protein
- Length
- 262 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- O95166
- Ligands
- ACE, OXE, NA, CL, NH2
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, C | — | protein | 119 | — | O95166 |
| D, B | — | protein | 12 | — | — |
Ligands and binding sites
- ACE · Acetyl group · ligand · 2 copies · chains D, C, A, B
- OXE · Ortho-xylene · ligand · 2 copies · chains D, C, A, B
- NA · Sodium ion · metal · chains A
- CL · Chloride ion · ion · 8 copies · chains A, C
- NH2 · Amino group · ion · 2 copies · chains D, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7ZL7 · Human GABARAP in complex with stapled peptide Pen8-ortho · the same entry in another collection · chain B against B, TM-score 1.00
- O95166 · AlphaFold monomer V2.0 prediction for gamma-aminobutyric acid receptor-associated protein… · a predicted model of the same protein · chain C against A, TM-score 0.96
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O95166
- Elsewhere: RCSB PDB 7ZL7 · PDBe 7ZL7 · UniProt O95166
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