MolNFT v1 · #190489 · protein
Crystal structure of mutt-8-oxo-dgtp complex: reaction for 12 hr using 5 mm MN2+
7X9I: “Crystal structure of mutt-8-oxo-dgtp complex: reaction for 12 hr using 5 mm MN2+”. X-ray diffraction, 7 ligands (8DG, 8OG, GLC). MolNFT v1 #190489 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7X9I
- Type
- protein
- Length
- 129 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A037YRW7
- Ligands
- 8DG, 8OG, GLC, FRU, MN, NA, SO4
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 129 | — | A0A037YRW7 |
Ligands and binding sites
- 8DG · 8-oxo-2'-deoxyguanosine-5'-triphosphate · ligand · chains A
- 8OG · 8-oxo-2'-deoxy-guanosine-5'-monophosphate · ligand · chains A
- GLC · alpha-D-glucopyranose · sugar · chains A
- FRU · beta-D-fructofuranose · sugar · chains A
- MN · Manganese (II) ion · metal · 3 copies · chains A
- NA · Sodium ion · metal · chains A
- SO4 · Sulfate ion · ion · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7X9I · Crystal structure of MutT-8-oxo-dGTP complex: Reaction for 12 hr using 5 mM Mn2+ · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A037YRW7
- Elsewhere: RCSB PDB 7X9I · PDBe 7X9I · UniProt A0A037YRW7
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