MolNFT v1 · #190478 · protein
Arabidopsis GDP-D-mannose pyrophosphorylase (VTC1) structure (unliganded)
7X8J: “Arabidopsis GDP-D-mannose pyrophosphorylase (VTC1) structure (unliganded)”. X-ray diffraction, 1 ligand (SO4). MolNFT v1 #190478 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7X8J
- Type
- protein
- Length
- 713 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- O22287
- Ligands
- SO4
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 357 | — | O22287 |
| B | — | protein | 356 | — | O22287 |
Ligands and binding sites
- SO4 · Sulfate ion · ion · 17 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7X8J · Arabidopsis GDP-D-mannose pyrophosphorylase (VTC1) structure (unliganded) · the same entry in another collection · chain A against A, TM-score 1.00
- O22287 · AlphaFold monomer V2.0 prediction for mannose-1-phosphate guanylyltransferase 1 (O22287) · a predicted model of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O22287
- Elsewhere: RCSB PDB 7X8J · PDBe 7X8J · UniProt O22287
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