MolNFT v1 · #190313 · protein
Crystal structure of HLA-A*2402 complexed with 4-mer lipopeptide
7WT3: “Crystal structure of HLA-A*2402 complexed with 4-mer lipopeptide”. X-ray diffraction, 2 ligands (MYR, ZN). MolNFT v1 #190313 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7WT3
- Type
- protein
- Length
- 677 residues
- Chains
- 6
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A411J078, P61769
- Ligands
- MYR, ZN
Structure
x-ray diffraction · 5 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 277 | — | A0A411J078 |
| B | — | protein | 100 | — | P61769 |
| C, F | — | protein | 4 | — | — |
| D | — | protein | 210 | — | A0A411J078 |
| E | — | protein | 82 | — | P61769 |
Ligands and binding sites
- MYR · Myristic acid · ligand · 2 copies · chains A, C, D, F
- ZN · Zinc ion · metal · 3 copies · chains A, D
- EDO · 1,2-ethanediol · additive · 37 copies · chains A, B, D, E
- ACT · Acetate ion · additive · 3 copies · chains A, D, E
- TRS · 2-amino-2-hydroxymethyl-propane-1,3-diol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A411J078
- Every structure of UniProt P61769
- Elsewhere: RCSB PDB 7WT3 · PDBe 7WT3 · UniProt A0A411J078 · UniProt P61769
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