MolNFT v1 · #190280 · protein

Cryo-EM structure of SARS-cov-2 omicron spike receptor-binding domain in complex with mouse ACE2

7WRI: “Cryo-EM structure of SARS-cov-2 omicron spike receptor-binding domain in complex with mouse ACE2”. Electron microscopy, 2 ligands (NAG, ZN). MolNFT v1 #190280 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 7WRI
Type: protein
Length: 790 residues
Chains: 2
Method: electron microscopy
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: Q8R0I0, P0DTC2
Ligands: NAG, ZN

Structure

electron microscopy · 2 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	595	—	Q8R0I0
B	—	protein	195	—	P0DTC2

Ligands and binding sites

NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · chains B
ZN · Zinc ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

7WRI · Cryo-EM structure of SARS-CoV-2 Omicron spike receptor-binding domain in complex with… · the same entry in another collection · chain A against A, TM-score 1.00
Q8R0I0 · AlphaFold monomer V2.0 prediction for angiotensin-converting enzyme 2 (Q8R0I0) · a predicted model of the same protein · chain A against A, TM-score 0.92

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q8R0I0
Every structure of UniProt P0DTC2
Elsewhere: RCSB PDB 7WRI · PDBe 7WRI · UniProt Q8R0I0 · UniProt P0DTC2

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