GL1X · GenesisL1 explorer

MolNFT v1 · #190210 · protein

Cryo-EM structure of vwf D'D3 dimer (wild type) complexed with D1D2 at 3.4 angstron resolution (1 unit)

7WN4: “Cryo-EM structure of vwf D'D3 dimer (wild type) complexed with D1D2 at 3.4 angstron resolution (1 unit)”. Electron microscopy, 2 ligands (NAG, CA). MolNFT v1 #190210 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
7WN4
Type
protein
Length
2,372 residues
Chains
4
Method
electron microscopy
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P04275
Ligands
NAG, CA

Structure

electron microscopy · 2 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
E, G—protein711—P04275
F, H—protein475—P04275

Ligands and binding sites

  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 8 copies · chains E, F, G, H
  • CA · Calcium ion · metal · 6 copies · chains E, F, G, H

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 7WN4 · Cryo-EM structure of VWF D'D3 dimer (wild type) complexed with D1D2 at 3.4 angstron… · the same entry in another collection · chain E against E, TM-score 1.00

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