MolNFT v1 · #190058 · protein
Crystal structure lpqy in complex with trehalose from mycobacterium tuberculosis
7WDA: “Crystal structure lpqy in complex with trehalose from mycobacterium tuberculosis”. X-ray diffraction, 2 ligands (GLC, SO4). MolNFT v1 #190058 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7WDA
- Type
- protein
- Length
- 1,717 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P9WGU9
- Ligands
- GLC, SO4
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 432 | — | P9WGU9 |
| B | — | protein | 433 | — | P9WGU9 |
| C | — | protein | 426 | — | P9WGU9 |
| D | — | protein | 426 | — | P9WGU9 |
Ligands and binding sites
- GLC · alpha-D-glucopyranose · sugar · 8 copies · chains A, B, C, D
- SO4 · Sulfate ion · ion · 4 copies · chains A, B, C, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7WDA · Crystal structure LpqY in complex with Trehalose from Mycobacterium tuberculosis · the same entry in another collection · chain D against D, TM-score 1.00
- P9WGU9 · AlphaFold monomer V2.0 prediction for trehalose-binding lipoprotein lpqy (P9WGU9) · a predicted model of the same protein · chain D against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P9WGU9
- Elsewhere: RCSB PDB 7WDA · PDBe 7WDA · UniProt P9WGU9
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