MolNFT v1 · #189950 · protein

Heme exporter in complex with mn-containing protoporphyrin IX, mn- anomalous data

7W7A: “Heme exporter in complex with mn-containing protoporphyrin IX, mn- anomalous data”. X-ray diffraction, 2 ligands (MNR, AGA). MolNFT v1 #189950 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 7W7A
Type: protein
Length: 3,370 residues
Chains: 12
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: Q6NEF2, Q6NEF1
Ligands: MNR, AGA

Structure

x-ray diffraction · 8 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	216	—	Q6NEF2
B	—	protein	341	—	Q6NEF1
C	—	protein	217	—	Q6NEF2
D, F, H	—	protein	342	—	Q6NEF1
E	—	protein	213	—	Q6NEF2
G	—	protein	227	—	Q6NEF2
I, K	—	protein	222	—	Q6NEF2
J, L	—	protein	343	—	Q6NEF1

Ligands and binding sites

MNR · Protoporphyrin IX containing Mn · ligand · 2 copies · chains B, D, F, H
AGA · (1S)-2-{[{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy) phosphoryl]oxy}-1-[(pentanoyloxy)methyl]ethyl octanoate · ligand · chains B
PGE · Triethylene glycol · additive · chains B
PEG · Di(hydroxyethyl)ether · additive · chains D
EDO · 1,2-ethanediol · additive · chains H

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

7W7A · Heme exporter in complex with Mn-containing protoporphyrin IX, Mn-anomalous data · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q6NEF2
Every structure of UniProt Q6NEF1
Elsewhere: RCSB PDB 7W7A · PDBe 7W7A · UniProt Q6NEF2 · UniProt Q6NEF1

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.