MolNFT v1 · #189928 · protein
Crystal structure of ERK2 with an allosteric inhibitor
7W5O: “Crystal structure of ERK2 with an allosteric inhibitor”. X-ray diffraction, 3 ligands (5ID, 6GI, NA). MolNFT v1 #189928 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7W5O
- Type
- protein
- Length
- 696 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P28482
- Ligands
- 5ID, 6GI, NA
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 350 | — | P28482 |
| B | — | protein | 346 | — | P28482 |
Ligands and binding sites
- 5ID · (2R,3R,4S,5R)-2-(4-amino-5-iodo-7H-pyrrolo[2,3-d]pyrimidin-7-yl)-5-(hydroxymethyl)tetrahydrofuran-3, 4-diol · ligand · chains A
- 6GI · 13-[4-({imidazo[1,2-a]pyridin-2-yl}methoxy)phenyl]-4,8-dioxa-12,14,16,18-tetraazatetracyclo[9.7.0.0^{3, 9}.0^{12,17}]octadeca-1(11),2,9,15,17-pentaen-15-amine · ligand · chains A, B
- NA · Sodium ion · metal · chains A
- MLA · Malonic acid · additive · 6 copies · chains A, B
- SIN · Succinic acid · additive · 2 copies · chains A
- EPE · 4-(2-hydroxyethyl)-1-piperazine ethanesulfonic acid · additive · 2 copies · chains A, B
- TAR · D(-)-tartaric acid · additive · chains B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7W5O · Crystal structure of ERK2 with an allosteric inhibitor · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P28482
- Elsewhere: RCSB PDB 7W5O · PDBe 7W5O · UniProt P28482
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