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MolNFT v1 · #189928 · protein

Crystal structure of ERK2 with an allosteric inhibitor

7W5O: “Crystal structure of ERK2 with an allosteric inhibitor”. X-ray diffraction, 3 ligands (5ID, 6GI, NA). MolNFT v1 #189928 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
7W5O
Type
protein
Length
696 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P28482
Ligands
5ID, 6GI, NA

Structure

x-ray diffraction · 2 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein350—P28482
B—protein346—P28482

Ligands and binding sites

  • 5ID · (2R,3R,4S,5R)-2-(4-amino-5-iodo-7H-pyrrolo[2,3-d]pyrimidin-7-yl)-5-(hydroxymethyl)tetrahydrofuran-3, 4-diol · ligand · chains A
  • 6GI · 13-[4-({imidazo[1,2-a]pyridin-2-yl}methoxy)phenyl]-4,8-dioxa-12,14,16,18-tetraazatetracyclo[9.7.0.0^{3, 9}.0^{12,17}]octadeca-1(11),2,9,15,17-pentaen-15-amine · ligand · chains A, B
  • NA · Sodium ion · metal · chains A
  • MLA · Malonic acid · additive · 6 copies · chains A, B
  • SIN · Succinic acid · additive · 2 copies · chains A
  • EPE · 4-(2-hydroxyethyl)-1-piperazine ethanesulfonic acid · additive · 2 copies · chains A, B
  • TAR · D(-)-tartaric acid · additive · chains B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 7W5O · Crystal structure of ERK2 with an allosteric inhibitor · the same entry in another collection · chain A against A, TM-score 1.00

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