MolNFT v1 · #189579 · protein
Oxy-deoxy intermediate of V2 hemoglobin at 26% oxygen saturation
7VLF: “Oxy-deoxy intermediate of V2 hemoglobin at 26% oxygen saturation”. X-ray diffraction, 5 ligands (HEM, NAG, FUC). MolNFT v1 #189579 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7VLF
- Type
- protein
- Length
- 1,175 residues
- Chains
- 8
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- S0BBU7, S0BBR6, S0BCU7, S0BAP9
- Ligands
- HEM, NAG, FUC, CA, OXY
Structure
x-ray diffraction · 6 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, E | — | protein | 146 | — | S0BBU7 |
| B | — | protein | 143 | — | S0BBR6 |
| C, G | — | protein | 150 | — | S0BCU7 |
| D | — | protein | 149 | — | S0BAP9 |
| F | — | protein | 144 | — | S0BBR6 |
| H | — | protein | 147 | — | S0BAP9 |
Ligands and binding sites
- HEM · Protoporphyrin IX containing Fe · ligand · 8 copies · chains A, D, B, C, E, H, F, G
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 2 copies · chains D, H
- FUC · alpha-L-fucopyranose · sugar · 2 copies · chains A, D, E
- CA · Calcium ion · metal · 2 copies · chains B, F
- OXY · Oxygen molecule · ion · 4 copies · chains C, D, F, G
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7VLF · Oxy-deoxy intermediate of V2 hemoglobin at 26% oxygen saturation · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt S0BBU7
- Every structure of UniProt S0BBR6
- Every structure of UniProt S0BCU7
- Every structure of UniProt S0BAP9
- Elsewhere: RCSB PDB 7VLF · PDBe 7VLF · UniProt S0BBU7 · UniProt S0BBR6 · UniProt S0BCU7 · UniProt S0BAP9
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.