MolNFT v1 · #189340 · protein
1.3 ångström resolution crystal structure of SARS-cov-2 nucleocapsid dimerization domain, pH 8.5
7VBF · Nucleoprotein: “1.3 ångström resolution crystal structure of SARS-cov-2 nucleocapsid dimerization domain, pH 8.5”. X-ray diffraction. MolNFT v1 #189340 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7VBF
- Type
- protein
- Length
- 226 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Nucleoprotein
- UniProt
- P0DTC9
Structure
x-ray diffraction · 2 distinct chains · 38% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nucleoprotein | protein | 116 | 38% helix, 19% strand | P0DTC9 |
| B | Nucleoprotein | protein | 110 | 37% helix, 21% strand | P0DTC9 |
Interfaces
1 interface between chains.
- A–B · 2702 Ų buried · 42 hydrogen bonds · protein-protein
Compared structures
- 7VBF · 1.3 Angstrom Resolution Crystal Structure of SARS-CoV-2 Nucleocapsid dimerization domain… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0DTC9
- Elsewhere: RCSB PDB 7VBF · PDBe 7VBF · UniProt P0DTC9
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