MolNFT v1 · #189043 · protein
Crystal structure of putative glucose 1-dehydrogenase from burkholderia cenocepacia in complex with NADP and a potential reaction product
7V0H: “Crystal structure of putative glucose 1-dehydrogenase from burkholderia cenocepacia in complex with NADP and…”. X-ray diffraction, 4 ligands (NAP, OUO, CA). MolNFT v1 #189043 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 7V0H
- Type
- protein
- Length
- 1,982 residues
- Chains
- 8
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- B4E6Z1
- Ligands
- NAP, OUO, CA, NA
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C, D, E, F, H | — | protein | 247 | — | B4E6Z1 |
| G | — | protein | 253 | — | B4E6Z1 |
Ligands and binding sites
- NAP · Nadp nicotinamide-adenine-dinucleotide phosphate · ligand · 8 copies · chains A, B, C, D, E, F, G, H
- OUO · (2R)-2-(hydroxymethyl)pentanedioic acid · ligand · 8 copies · chains A, B, C, D, E, F, G, H
- CA · Calcium ion · metal · 8 copies · chains A, D, B, C, E, H, F, G
- NA · Sodium ion · metal · 6 copies · chains A, C, B, D, E, G, F, H
- GOL · Glycerol · additive · 6 copies · chains A, B, C, D, E, F, G, H
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7V0H · Crystal Structure of Putative glucose 1-dehydrogenase from Burkholderia cenocepacia in… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B4E6Z1
- Elsewhere: RCSB PDB 7V0H · PDBe 7V0H · UniProt B4E6Z1
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