MolNFT v1 · #188724 · protein + DNA
Human DNA polymerase eta-DNA-dgmpnpp ternary mismatch complex in 2.0 mm MG2+ for 600S
7U7X: “Human DNA polymerase eta-DNA-dgmpnpp ternary mismatch complex in 2.0 mm MG2+ for 600S”. X-ray diffraction, 2 ligands (XG4, MG). MolNFT v1 #188724 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7U7X
- Type
- protein + DNA
- Length
- 449 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q9Y253
- Ligands
- XG4, MG
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 430 | — | Q9Y253 |
| T | — | dna | 11 | — | — |
| P | — | dna | 8 | — | — |
Ligands and binding sites
- XG4 · 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]guanosine · ligand · chains A, T, P
- MG · Magnesium ion · metal · 2 copies · chains A, P
- GOL · Glycerol · additive · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7U7X · Human DNA polymerase eta-DNA-dGMPNPP ternary mismatch complex in 2.0 mM Mg2+ for 600s · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9Y253
- Elsewhere: RCSB PDB 7U7X · PDBe 7U7X · UniProt Q9Y253
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