MolNFT v1 · #188577 · protein
Structure of lassa virus glycoprotein (josiah) bound to Fab 25.10C
7TYV: “Structure of lassa virus glycoprotein (josiah) bound to Fab 25.10C”. Electron microscopy, 3 ligands (NAG, MAN, BMA). MolNFT v1 #188577 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7TYV
- Type
- protein
- Length
- 2,114 residues
- Chains
- 12
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P08669
- Ligands
- NAG, MAN, BMA
Structure
electron microscopy · 5 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 147 | — | P08669 |
| B, C | — | protein | 148 | — | P08669 |
| D, G, H | — | protein | 207 | — | — |
| E, L, K | — | protein | 209 | — | — |
| a, b, c | — | protein | 141 | — | P08669 |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 37 copies · chains A, D, a, E, B, G, K, b, C, H, L, c
- MAN · alpha-D-mannopyranose · sugar · 14 copies · chains E, a, A, D, K, B, G, L, C, H
- BMA · beta-D-mannopyranose · sugar · 7 copies · chains E, a, A, B, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7TYV · Structure of Lassa Virus glycoprotein (Josiah) bound to Fab 25.10C · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P08669
- Elsewhere: RCSB PDB 7TYV · PDBe 7TYV · UniProt P08669
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