MolNFT v1 · #188398 · protein
Crystal structure of alpn-202 (engineered CD80 vigd) in complex with pd-L1
7TPS: “Crystal structure of alpn-202 (engineered CD80 vigd) in complex with pd-L1”. X-ray diffraction, 2 ligands (NAG, FUC). MolNFT v1 #188398 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7TPS
- Type
- protein
- Length
- 621 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P33681, Q9NZQ7
- Ligands
- NAG, FUC
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 106 | — | P33681 |
| B, D | — | protein | 209 | — | Q9NZQ7 |
| C | — | protein | 97 | — | P33681 |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 14 copies · chains A, B, C, D
- FUC · alpha-L-fucopyranose · sugar · 4 copies · chains B, D
- GOL · Glycerol · additive · chains B, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7TPS · Crystal structure of ALPN-202 (engineered CD80 vIgD) in complex with PD-L1 · the same entry in another collection · chain A against A, TM-score 1.00
- P33681 · AlphaFold monomer V2.0 prediction for T-lymphocyte activation antigen CD80 (P33681) · a predicted model of the same protein · chain A against A, TM-score 0.96
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P33681
- Every structure of UniProt Q9NZQ7
- Elsewhere: RCSB PDB 7TPS · PDBe 7TPS · UniProt P33681 · UniProt Q9NZQ7
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