MolNFT v1 · #188311 · protein
Crystal structure of cytochrome C from pseudomonas putida S16
7TLX · C-type cytochrome: “Crystal structure of cytochrome C from pseudomonas putida S16”. X-ray diffraction, 1 ligand (HEC), 1 pocket (best druggability 0.70). MolNFT v1 #188311 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 7TLX
- Type
- protein
- Length
- 102 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- C-type cytochrome
- UniProt
- A0A0E3ELC2
- Ligands
- HEC
- Pockets
- 1 · best druggability 0.70
Structure
x-ray diffraction · 1 distinct chain · 36% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| 1 | C-type cytochrome | protein | 102 | 36% helix, 2% strand | A0A0E3ELC2 |
Ligands and binding sites
- HEC · Heme C · ligand · chains 1
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 195 | 0.70 | 0.87 | 33 | HEC |
Modifications
Observed in the structure: 2 cofactor, 1 disulfide (heme c attachment, disulfide).
Compared structures
- 7TLX · Crystal Structure of cytochrome c from Pseudomonas putida S16 · the same entry in another collection · chain 1 against 1, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0E3ELC2
- Elsewhere: RCSB PDB 7TLX · PDBe 7TLX · UniProt A0A0E3ELC2
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