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Crystal structure of cytochrome C from pseudomonas putida S16

Analyse Crystal structure of cytochrome C from pseudomonas putida S16 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 7TLX
Type: protein
Length: 102 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: C-type cytochrome
UniProt: A0A0E3ELC2
Ligands: HEC
Pockets: 1 · best druggability 0.70

Structure

x-ray diffraction · 1 distinct chain · 36% helix, 2% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
1	C-type cytochrome	protein	102	36% helix, 2% strand	A0A0E3ELC2

Ligands and binding sites

HEC · Heme C · ligand · chains 1

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	195	0.70	0.87	33	HEC

Modifications

Observed in the structure: 2 cofactor, 1 disulfide (heme c attachment, disulfide).

Compared structures

7TLX · Crystal Structure of cytochrome c from Pseudomonas putida S16 · the same entry in another collection · chain 1 against 1, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A0A0E3ELC2
Elsewhere: RCSB PDB 7TLX · PDBe 7TLX · UniProt A0A0E3ELC2

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