MolNFT v1 · #188258 · protein
Yeast ATP synthase F1 region state 1BINDING(A-D) with 10 mm ATP
7TJX: “Yeast ATP synthase F1 region state 1BINDING(A-D) with 10 mm ATP”. Electron microscopy, 4 ligands (ATP, ADP, MG). MolNFT v1 #188258 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7TJX
- Type
- protein
- Length
- 3,072 residues
- Chains
- 7
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P07251, P00830, P38077
- Ligands
- ATP, ADP, MG, PO4
Structure
electron microscopy · 7 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 471 | — | P07251 |
| B | — | protein | 477 | — | P07251 |
| C | — | protein | 484 | — | P07251 |
| D | — | protein | 453 | — | P00830 |
| E | — | protein | 456 | — | P00830 |
| F | — | protein | 467 | — | P00830 |
| G | — | protein | 264 | — | P38077 |
Ligands and binding sites
- ATP · Adenosine-5'-triphosphate · ligand · 4 copies · chains A, D, B, E, C, F
- ADP · Adenosine-5'-diphosphate · ligand · chains C, D
- MG · Magnesium ion · metal · 5 copies · chains A, B, C, D, F
- PO4 · Phosphate ion · ion · chains C, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7TJX · Yeast ATP synthase F1 region State 1binding(a-d) with 10 mM ATP · the same entry in another collection · chain G against G, TM-score 1.00
- P07251 · AlphaFold monomer V2.0 prediction for ATP synthase subunit alpha, mitochondrial (P07251) · a predicted model of the same protein · chain C against A, TM-score 0.99
- P00830 · AlphaFold monomer V2.0 prediction for ATP synthase subunit beta, mitochondrial (P00830) · a predicted model of the same protein · chain D against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P07251
- Every structure of UniProt P00830
- Every structure of UniProt P38077
- Elsewhere: RCSB PDB 7TJX · PDBe 7TJX · UniProt P07251 · UniProt P00830 · UniProt P38077
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