MolNFT v1 · #187992 · protein
Cryo-EM structure of TRPV5 in nanodiscs with PI(4,5)P2 at PH6 state 1
7T6M: “Cryo-EM structure of TRPV5 in nanodiscs with PI(4,5)P2 at PH6 state 1”. Electron microscopy, 1 ligand (PIO). MolNFT v1 #187992 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7T6M
- Type
- protein
- Length
- 2,424 residues
- Chains
- 4
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q9XSM3
- Ligands
- PIO
Structure
electron microscopy · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C, D | — | protein | 606 | — | Q9XSM3 |
Ligands and binding sites
- PIO · [(2R)-2-octanoyloxy-3-[oxidanyl-[(1R,2R,3S,4R,5R,6S)-2, 3,6-tris(oxidanyl)-4,5-diphosphonooxy-cyclohexyl]oxy-phosphoryl]oxy-propyl] octanoate · ligand · 4 copies · chains A, B, C, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7T6M · Cryo-EM structure of TRPV5 in nanodiscs with PI(4,5)P2 at pH6 state 1 · the same entry in another collection · chain A against A, TM-score 1.00
- Q9XSM3 · AlphaFold monomer V2.0 prediction for transient receptor potential cation channel… · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9XSM3
- Elsewhere: RCSB PDB 7T6M · PDBe 7T6M · UniProt Q9XSM3
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