MolNFT v1 · #187985 · protein
E. COLI dihydroorotate dehydrogenase bound to the ubiquinone surrogate dcip
7T6C: “E. COLI dihydroorotate dehydrogenase bound to the ubiquinone surrogate dcip”. X-ray diffraction, 3 ligands (ORO, RLM, FMN). MolNFT v1 #187985 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7T6C
- Type
- protein
- Length
- 670 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P0A7E1
- Ligands
- ORO, RLM, FMN
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | — | protein | 335 | — | P0A7E1 |
Ligands and binding sites
- ORO · Orotic acid · ligand · 2 copies · chains A, B
- RLM · 2,6-bis(chloranyl)-4-[(4-hydroxyphenyl)amino]phenol · ligand · 2 copies · chains A, B
- FMN · Flavin mononucleotide · ligand · 2 copies · chains A, B
- PE4 · 2-{2-[2-(2-{2-[2-(2-ethoxy-ethoxy)-ethoxy]-ethoxy}-ethoxy)-ethoxy]-ethoxy}-ethanol · additive · chains A
- GOL · Glycerol · additive · chains B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7T6C · E. coli dihydroorotate dehydrogenase bound to the ubiqui surrogate DCIP · the same entry in another collection · chain A against A, TM-score 1.00
- P0A7E1 · AlphaFold monomer V2.0 prediction for dihydroorotate dehydrogenase (quinone) (P0A7E1) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0A7E1
- Elsewhere: RCSB PDB 7T6C · PDBe 7T6C · UniProt P0A7E1
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