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MolNFT v1 · #187768 · protein

Human cytochrome P450 (cyp) 3A5 ternary complex with azamulin

7SV2: “Human cytochrome P450 (cyp) 3A5 ternary complex with azamulin”. X-ray diffraction, 2 ligands (MWY, HEM). MolNFT v1 #187768 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
7SV2
Type
protein
Length
1,824 residues
Chains
4
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P20815
Ligands
MWY, HEM

Structure

x-ray diffraction · 4 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein465—P20815
B—protein465—P20815
C—protein456—P20815
D—protein438—P20815

Ligands and binding sites

  • MWY · (3as,4r,5s,6r,8r,9r,9ar,10r)-6-ethyl-5-hydroxy-4,6,9, 10-tetramethyl-1-oxodecahydro-3A,9-propanocyclopenta[8]annulen-8-yl [(5-amino-1H-1,2,4-triazol-3-yl)sulfanyl]acetate · ligand · 8 copies · chains A, B, C, D
  • HEM · Protoporphyrin IX containing Fe · ligand · 4 copies · chains A, B, C, D

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 7SV2 · Human Cytochrome P450 (CYP) 3A5 ternary complex with azamulin · the same entry in another collection · chain D against D, TM-score 1.00
  • P20815 · AlphaFold monomer V2.0 prediction for cytochrome P450 3A5 (P20815) · a predicted model of the same protein · chain A against A, TM-score 0.99

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