MolNFT v1 · #187706 · protein

Metal dependent activation of plasmodium falciparum M17 aminopeptidase (inactive form), spacegroup P22121

7SRV: “Metal dependent activation of plasmodium falciparum M17 aminopeptidase (inactive form), spacegroup P22121”. X-ray diffraction, 4 ligands (ZN, CA, CO3). MolNFT v1 #187706 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 7SRV
Type: protein
Length: 3,082 residues
Chains: 6
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: Q8IL11
Ligands: ZN, CA, CO3, PO4

Structure

x-ray diffraction · 6 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	519	—	Q8IL11
B	—	protein	518	—	Q8IL11
C	—	protein	524	—	Q8IL11
D	—	protein	506	—	Q8IL11
E	—	protein	513	—	Q8IL11
F	—	protein	502	—	Q8IL11

Ligands and binding sites

ZN · Zinc ion · metal · 12 copies · chains A, C, B, D, F, E
CA · Calcium ion · metal · 12 copies · chains A, B, C, D, E, F
CO3 · Carbonate ion · ion · 6 copies · chains A, B, C, D, E, F
PO4 · Phosphate ion · ion · 2 copies · chains A, B, C, D, E, F
ACT · Acetate ion · additive · 8 copies · chains A, B, C, D, E, F
EDO · 1,2-ethanediol · additive · 6 copies · chains A, C, D, F
GOL · Glycerol · additive · chains D, E

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

7SRV · Metal dependent activation of Plasmodium falciparum M17 aminopeptidase (inactive form)… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q8IL11
Elsewhere: RCSB PDB 7SRV · PDBe 7SRV · UniProt Q8IL11

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