MolNFT v1 · #187430 · protein
Crystal structure of human fibrillarin in complex with compound 1 from single soak
7SE9: “Crystal structure of human fibrillarin in complex with compound 1 from single soak”. X-ray diffraction, 1 ligand (8W1). MolNFT v1 #187430 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7SE9
- Type
- protein
- Length
- 456 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P22087
- Ligands
- 8W1
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | — | protein | 228 | — | P22087 |
Ligands and binding sites
- 8W1 · (5S)-3-methyl-7-(trifluoromethyl)pyrrolo[1,2-a]pyrazin-1(2H)-one · ligand · 2 copies · chains A, B
- FMT · Formic acid · additive · 8 copies · chains A, B
- DMS · Dimethyl sulfoxide · additive · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7SE9 · Crystal structure of human Fibrillarin in complex with compound 1 from single soak · the same entry in another collection · chain A against A, TM-score 1.00
- P22087 · AlphaFold monomer V2.0 prediction for rRNA 2'-O-methyltransferase fibrillarin (P22087) · a predicted model of the same protein · chain A against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P22087
- Elsewhere: RCSB PDB 7SE9 · PDBe 7SE9 · UniProt P22087
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