MolNFT v1 · #187362 · protein
Cryo-EM structure of TMEM106B fibrils extracted from a ftld-tdp patient, polymorph 3
7SAS: “Cryo-EM structure of TMEM106B fibrils extracted from a ftld-tdp patient, polymorph 3”. Electron microscopy, 1 ligand (NAG). MolNFT v1 #187362 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7SAS
- Type
- protein
- Length
- 1,350 residues
- Chains
- 10
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q9NUM4
- Ligands
- NAG
Structure
electron microscopy · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C, D, E, F, G, H, I, J | — | protein | 135 | — | Q9NUM4 |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 40 copies · chains A, D, B, F, C, H, E, J, G, I
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7SAS · Cryo-EM structure of TMEM106B fibrils extracted from a FTLD-TDP patient, polymorph 3 · the same entry in another collection · chain J against J, TM-score 1.00
- Q9NUM4 · AlphaFold monomer V2.0 prediction for transmembrane protein 106B (Q9NUM4) · a predicted model of the same protein · chain A against A, TM-score 0.22
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9NUM4
- Elsewhere: RCSB PDB 7SAS · PDBe 7SAS · UniProt Q9NUM4
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